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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814161.1_cds_XP_016497836.1_11926
CDS Infomation

[gene=LOC107816617] [db_xref=GeneID:107816617] [protein=vacuolar protein sorting-associated protein 27-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016497836.1] [location=complement(join(<19696..20523,21266..21556,23202..23351))] [gbkey=CDS]
Sequence

ATGGCATCTGGCTCATCGGGGAGACCAAACAATGCGGGTTTTAATTTCGGGTCGGATGGT
ATTTTGTGTTCTTATGAAGACTATGCTGCTAATCAAGACCCATCTAATGGAACCCATTCT
GATCCTGTGATCGCTCCCAATTCTGCTAAGGAGTTCCACAAAAGCAGAATGACAAGGTCA
TCAATGTTTCCTGCTCCAGCATATAGTCCACCAGAAGAATCTTCCTTCAATCAAGACATG
ATATCTACTGTTGAGAAGACCATGAAGAAATATGCTGACAATCTCATGCGTTTCCTAGAG
GGAATAAGCTCACGCTTGTCGCAGTTGGAATTATACTGTTACAATCTTGATAAGTCTATT
GGAGAAATGCGCTCTGATTTAGTTCGGGATCATGGTGAGGCAGATTCAAAACTGAAGGCT
CTTGAGAAGCATGTGCAAGAGGTCCACCGATCTGTGCAGATTCTAAGAGATAAACAAGAA
CTTGCTGAAACTCAAAAGGAGCTGGCCAAGCTTCAGCTCGCACAGAAAGACTCAACTTCA
TCCAGCATTTCTCAGCAGAATGACGAGAAGAATGCTCAACACCTGTCTGATGCTAAAAAA
AGTGATAACTCACCTGAAGGGCATGGACAGCAACTGGCTCTTGCACTACCTCATCAAGTG
GCACCCCAGGCTTCTCTTACTAACCGACCTGTGGAGCAGCCACAACAGCTACCAGTGCAG
CCTCCGCAACCAATTCCATCCCAAAGTATGCCCCAGTCACAAGGATATTATTTACCCTCT
CCTCAGATGGTAAATCAACAAGCTCCAACTCAGTTTCCTCAAGGCCAGTATTTGTCATCT
GACTCCCAGTATCGAAATCCTCAAATGCAAGTACCACCACAGCCAGCGCCACCTCAGGTG
AATCAGACACCACAAGTCCAGTCAGTGCCCCAATATCAGCAGCAGTGGGCCCAACAGGTG
CCTCAACAGGTTCAACATTCACAAATACCAAGTATGCAACAGCAAGCTAGACCTACATCA
CCTGCTGTTTATCCCTCTTATCCGCCCAGTCAGCCTAATCCTCCTCCTGAGACGGCACCC
AATAGTATGCCAATGCAAGTGCCATTTTCTGGAATATCTCAACCAGTTGCTAGCCGTCCC
GAAGCAATGTCTTATGGGTATGATAGGTCTGGCAGGCCCCTTCAGCAACAGCCTGTGGCG
CCGCATCTTAAGCCTTCATTTGGTGCAGTGGGCGATGGGTATGCAGCTAATGGAGCTCAT
CCAACACTT

Peptide Sequence

PEP ID

XP_016497836.1
PEP Infomation

PREDICTED: vacuolar protein sorting-associated protein 27-like, partial [Nicotiana tabacum]
Sequence

MASGSSGRPNNAGFNFGSDGILCSYEDYAANQDPSNGTHSDPVIAPNSAKEFHKSRMTRS
SMFPAPAYSPPEESSFNQDMISTVEKTMKKYADNLMRFLEGISSRLSQLELYCYNLDKSI
GEMRSDLVRDHGEADSKLKALEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKDSTS
SSISQQNDEKNAQHLSDAKKSDNSPEGHGQQLALALPHQVAPQASLTNRPVEQPQQLPVQ
PPQPIPSQSMPQSQGYYLPSPQMVNQQAPTQFPQGQYLSSDSQYRNPQMQVPPQPAPPQV
NQTPQVQSVPQYQQQWAQQVPQQVQHSQIPSMQQQARPTSPAVYPSYPPSQPNPPPETAP
NSMPMQVPFSGISQPVASRPEAMSYGYDRSGRPLQQQPVAPHLKPSFGAVGDGYAANGAH
PTLSPGNAYVMYDGEGTRGHPPPQPNFSQSGYPPSSFAPQNPQSTPSPNIMVRP

Transcript Sequence

Gene sequence data has not been registered.